Link to Y71H2AM.5.1Link to Y71H2AM.4.1Link to Y71H2AM.5.3Link to Y71H2AM.5.2Link to Y71H2AM.4.2RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to Y71H2AM.4.1Link to Y71H2AM.5.1Link to Y71H2AM.5.2Link to Y71H2AM.5.3geneMap Link to Y71H2AM.6Link to Y71H2AM.20a.1Link to Y71H2AM.20bLink to Y71H2AM.20a.2Link to Y71H2AM.5.1Link to Y71H2AM.5.3Link to Y71H2AM.5.2Link to Y71H2AM.4.1RNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to Y71H2AM.5.1Link to Y71H2AM.5.2Link to Y71H2AM.4.1Link to Y71H2AM.5.3geneMap Link to Y71H2AM.5.1Link to Y71H2AM.5.3Link to Y71H2AM.5.2Link to Y71H2AM.4.1Link to Y71H2AM.4.2RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to Y71H2AM.4.1Link to Y71H2AM.5.1Link to Y71H2AM.5.2Link to Y71H2AM.5.3geneMap
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RNAi Experiment: JA:Y71H2_388.c Ace View of JA:Y71H2_388.c
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y71H2AM.5
Description of "Y71H2AM.5"  Associated GO Term : cytochrome-c oxidase activity
KOG Annotation  Cytochrome c oxidase, subunit VIb/COX12
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (III:2785695..2786700)
Transcript overlap: 484 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 421
Specificity index: 0.411
Wormbase (BLAST) RNAi primary
External "Y71H2AM.5" Links  Wormbase NCBI
Gene Inhibited  Y71H2AM.20
Description of "Y71H2AM.20"  Associated GO Term : phosphatase activator activity
Evidence for Inhibition 
ePCR Status: Bottom50_percentile_ePCR (III:2785695..2786700)
Transcript overlap: 196 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 154
Relative score: 0.431 (Best raw score= for Gene )
Specificity index: 0.177
Wormbase (BLAST) RNAi primary
External "Y71H2AM.20" Links  Wormbase NCBI
Gene Inhibited  Y71H2AM.4
KOG Annotation  NADH:ubiquinone oxidoreductase, NDUFC2/B14.5B subunit
What's a KOG?
Evidence for Inhibition 
ePCR Status: Top50_percentile_ePCR (III:2785695..2786700)
Transcript overlap: 399 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 357
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.411
External "Y71H2AM.4" Links  Wormbase NCBI
JA:Y71H2_388.c Phenotypes Help with Phenotypes
Larval  Gro
Adult  Stp brood size (1 out of 5)
JA:Y71H2_388.c Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_Y71H2_388.c (PCR_reagent)
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
Date  2003-1-10
Gene Plot of Y71H2AM.5 Browse using GBrowse
Gene Graph
Gene Plot of Y71H2AM.20 Browse using GBrowse
Gene Graph
Gene Plot of Y71H2AM.4 Browse using GBrowse
Gene Graph