Link to Y77E11A.3RNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentgeneMap Link to Y77E11A.11.1Link to Y77E11A.11.2Link to Y77E11A.3RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to Y67D8C.4Link to Y67D8C.3b.2Link to Y67D8C.3aRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap
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RNAi Experiment: JA:Y77E11A_3443.d Ace View of JA:Y77E11A_3443.d
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y77E11A.3
Evidence for Inhibition 
ePCR Status: Best_ePCR (IV:1445777..1448480)
Transcript overlap: 354 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 270
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.541
Wormbase (BLAST) RNAi primary
External "Y77E11A.3" Links  Wormbase NCBI
Gene Inhibited  Y77E11A.11 (clp-7)
Description of "Y77E11A.11"  clp-7 encodes a member of the calpain family of cysteine proteases.
KOG Annotation  Cytosolic Ca2+-dependent cysteine protease (calpain), large subunit (EF-Hand protein superfamily)
What's a KOG?
Evidence for Inhibition 
ePCR Status: Top50_percentile_ePCR (IV:1445777..1448480)
Transcript overlap: 250 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 229
Relative score: 0.848 (Best raw score= for Gene )
Specificity index: 0.459
Wormbase (BLAST) RNAi primary
External "Y77E11A.11" Links  Wormbase NCBI
Gene Inhibited  Y67D8C.4
Evidence for Inhibition 
Sliding Window Raw score: 59
External "Y67D8C.4" Links  Wormbase NCBI
JA:Y77E11A_3443.d Phenotypes Help with Phenotypes
Phenotype  WT
JA:Y77E11A_3443.d Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_Y77E11A_3443.d (PCR_reagent)
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
Date  2003-1-10
Gene Plot of Y67D8C.4 Browse using GBrowse
Gene Graph
Gene Plot of Y77E11A.3 Browse using GBrowse
Gene Graph
Gene Plot of Y77E11A.11 Browse using GBrowse
Gene Graph