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RNAi Experiment: JA:Y81G3A.5 Ace View of JA:Y81G3A.5
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y81G3A.5 (col-86)
Description of "Y81G3A.5"  Associated GO Term : structural constituent of cuticle
KOG Annotation  Collagens (type IV and type XIII), and related proteins
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (II:13095925..13098245)
Transcript overlap: 954 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 870
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.898
Wormbase (BLAST) RNAi primary
External "Y81G3A.5" Links  Wormbase NCBI
Gene Inhibited  F29C12.2
Description of "F29C12.2"  Associated GO Term : binding
KOG Annotation  Protein required for meiosis
Neural adherens junction protein Plakophilin and related Armadillo repeat proteins
What's a KOG?
Evidence for Inhibition 
ePCR Status: Bottom50_percentile_ePCR (II:13095925..13098245)
Transcript overlap: 99 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 99
Relative score: 0.114 (Best raw score= for Gene )
Specificity index: 0.102
External "F29C12.2" Links  Wormbase NCBI
JA:Y81G3A.5 Phenotypes Help with Phenotypes
Phenotype  WT
JA:Y81G3A.5 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_Y81G3A.5 (PCR_reagent)
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
Date  2003-1-10
Gene Plot of Y81G3A.5 Browse using GBrowse
Gene Graph
Gene Plot of F29C12.2 Browse using GBrowse
Gene Graph