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RNAi Experiment: JA:Y87G2A.n Ace View of JA:Y87G2A.n
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y87G2A.15 (grd-15)
Evidence for Inhibition 
ePCR Status: Best_ePCR (I:13564529..13566499)
Transcript overlap: 630 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 546
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.665
Wormbase (BLAST) RNAi primary
External "Y87G2A.15" Links  Wormbase NCBI
Gene Inhibited  Y87G2A.6 (cyn-15)
Description of "Y87G2A.6"  cyp-15 encodes a little-characterized cyclophilin homolog.
KOG Annotation  Cyclophilin-related peptidyl-prolyl cis-trans isomerase
What's a KOG?
Evidence for Inhibition 
ePCR Status: Bottom50_percentile_ePCR (I:13564529..13566499)
Transcript overlap: 296 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 275
Relative score: 0.504 (Best raw score= for Gene )
Specificity index: 0.335
Wormbase (BLAST) RNAi primary
External "Y87G2A.6" Links  Wormbase NCBI
JA:Y87G2A.n Phenotypes Help with Phenotypes
Phenotype  WT
JA:Y87G2A.n Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_Y87G2A.n (PCR_reagent)
Reference  Fraser AG et al. (2000) Nature "Functional genomic analysis of C. elegans chromosome I by systematic RNA ...."
Date  2000-11-16
Gene Plot of Y87G2A.15 Browse using GBrowse
Gene Graph
Gene Plot of Y87G2A.6 Browse using GBrowse
Gene Graph