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RNAi Experiment: JA:Y87G2A.w Ace View of JA:Y87G2A.w
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y87G2A.13
KOG Annotation  Predicted membrane protein
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (I:13601743..13604061)
Transcript overlap: 883 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 778
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.816
Wormbase (BLAST) RNAi primary
External "Y87G2A.13" Links  Wormbase NCBI
Gene Inhibited  Y6B3A.1
Description of "Y6B3A.1"  This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial.
Evidence for Inhibition 
ePCR Status: Bottom50_percentile_ePCR (I:13601743..13604061)
Transcript overlap: 175 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 175
Relative score: 0.226 (Best raw score= for Gene )
Specificity index: 0.184
External "Y6B3A.1" Links  Wormbase NCBI
JA:Y87G2A.w Phenotypes Help with Phenotypes
Phenotype  WT
JA:Y87G2A.w Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_Y87G2A.w (PCR_reagent)
Reference  Fraser AG et al. (2000) Nature "Functional genomic analysis of C. elegans chromosome I by systematic RNA ...."
Date  2000-11-16
Gene Plot of Y6B3A.1 Browse using GBrowse
Gene Graph
Gene Plot of Y87G2A.13 Browse using GBrowse
Gene Graph