Link to ZC21.2RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap RNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap RNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap RNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to Y105C5A.18Link to Y45F10B.7Link to ZK1225.8Link to Y39A3A.7geneMap Link to F52F10.1RNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to C13B9.1.1Link to C13B9.1.2RNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to F23A7.7geneMap Link to Y50D7A.1Link to Y50D7A.7.1Link to Y50D7A.7.2RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap
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RNAi Experiment: JA:ZC21.1 Ace View of JA:ZC21.1
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  ZC21.2 (trp-1)
Description of "ZC21.2"  Associated GO Term : cation channel activity
KOG Annotation  Receptor-activated Ca2+-permeable cation channels (STRPC family)
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (III:8540600..8542740)
Transcript overlap: 760 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 676
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.412
Wormbase (BLAST) RNAi primary
External "ZC21.2" Links  Wormbase NCBI
Gene Inhibited  Y105C5A.18
Evidence for Inhibition 
Sliding Window Raw score: 213
Relative score: 0.315 (Best raw score= for Gene )
Specificity index: 0.13
External "Y105C5A.18" Links  Wormbase NCBI
Gene Inhibited  Y45F10B.7
Evidence for Inhibition 
Sliding Window Raw score: 81
Relative score: 0.12 (Best raw score= for Gene )
Specificity index: 0.049
External "Y45F10B.7" Links  Wormbase NCBI
Gene Inhibited  B0344.1
Evidence for Inhibition 
Sliding Window Raw score: 211
Relative score: 0.312 (Best raw score= for Gene )
Specificity index: 0.129
External "B0344.1" Links  Wormbase NCBI
Gene Inhibited  F52F10.1
Evidence for Inhibition 
Sliding Window Raw score: 169
Relative score: 0.25 (Best raw score= for Gene )
Specificity index: 0.103
External "F52F10.1" Links  Wormbase NCBI
Gene Inhibited  ZK1225.8
Evidence for Inhibition 
Sliding Window Raw score: 133
Relative score: 0.197 (Best raw score= for Gene )
Specificity index: 0.081
External "ZK1225.8" Links  Wormbase NCBI
Gene Inhibited  C13B9.1
Evidence for Inhibition 
Sliding Window Raw score: 70
Relative score: 0.104 (Best raw score= for Gene )
Specificity index: 0.043
External "C13B9.1" Links  Wormbase NCBI
Gene Inhibited  Y50D7A.1
KOG Annotation  Kelch repeat-containing proteins
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 86
Relative score: 0.127 (Best raw score= for Gene )
Specificity index: 0.052
External "Y50D7A.1" Links  Wormbase NCBI
JA:ZC21.1 Phenotypes Help with Phenotypes
Phenotype  WT
JA:ZC21.1 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_ZC21.1 (PCR_reagent)
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
Date  2003-1-10
Gene Plot of Y105C5A.18 Browse using GBrowse
Gene Graph
Gene Plot of Y45F10B.7 Browse using GBrowse
Gene Graph
Gene Plot of B0344.1 Browse using GBrowse
Gene Graph
Gene Plot of ZC21.2 Browse using GBrowse
Gene Graph
Gene Plot of ZK1225.8 Browse using GBrowse
Gene Graph
Gene Plot of F52F10.1 Browse using GBrowse
Gene Graph
Gene Plot of C13B9.1 Browse using GBrowse
Gene Graph
Gene Plot of Y50D7A.1 Browse using GBrowse
Gene Graph