Link to ZK836.2.1Link to ZK836.2.2Link to ZK836.1RNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to ZK863.7Link to ZK836.2.1Link to ZK836.2.2Link to ZK836.3Link to ZK836.1RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap
Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 
RNAi Experiment: JA:ZK836.1 Ace View of JA:ZK836.1
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  ZK836.1 (lon-3)
Description of "ZK836.1"  Associated GO Term : structural constituent of cuticle
KOG Annotation  Collagens (type IV and type XIII), and related proteins
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (V:12199882..12200964)
Transcript overlap: 857 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 836
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.932
Wormbase (BLAST) RNAi primary
External "ZK836.1" Links  Wormbase NCBI
Gene Inhibited  ZK836.2
Description of "ZK836.2"  This gene encodes a protein predicted by Eisenberg and coworkers, with 68% accuracy, to be mitochondrial.
KOG Annotation  Predicted 2-oxoglutarate dehydrogenase, E1 subunit
What's a KOG?
Evidence for Inhibition 
ePCR Status: Bottom50_percentile_ePCR (V:12199882..12200964)
Transcript overlap: 103 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 61
Relative score: 0.073 (Best raw score= for Gene )
Specificity index: 0.068
Wormbase (BLAST) RNAi primary
External "ZK836.2" Links  Wormbase NCBI
JA:ZK836.1 Phenotypes Help with Phenotypes
Phenotype  WT
JA:ZK836.1 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_ZK836.1 (PCR_reagent)
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
Date  2003-1-10
Gene Plot of ZK836.2 Browse using GBrowse
Gene Graph
Gene Plot of ZK836.1 Browse using GBrowse
Gene Graph