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RNAi Experiment: JA:ZK836.1 Ace View of JA:ZK836.1
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  ZK836.1 (lon-3)
Description of "ZK836.1"  Associated GO Term : structural constituent of cuticle
KOG Annotation  Collagens (type IV and type XIII), and related proteins
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (V:12199882..12200964)
Transcript overlap: 857 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 836
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.932
Wormbase (BLAST) RNAi primary
External "ZK836.1" Links  Wormbase NCBI
Gene Inhibited  ZK836.2
Description of "ZK836.2"  This gene encodes a protein predicted by Eisenberg and coworkers, with 68% accuracy, to be mitochondrial.
KOG Annotation  Predicted 2-oxoglutarate dehydrogenase, E1 subunit
What's a KOG?
Evidence for Inhibition 
ePCR Status: Bottom50_percentile_ePCR (V:12199882..12200964)
Transcript overlap: 103 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 61
Relative score: 0.073 (Best raw score= for Gene )
Specificity index: 0.068
Wormbase (BLAST) RNAi primary
External "ZK836.2" Links  Wormbase NCBI
JA:ZK836.1 Phenotypes Help with Phenotypes
Phenotype  WT
JA:ZK836.1 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_ZK836.1 (PCR_reagent)
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
Date  2003-1-10
Gene Plot of ZK836.2 Browse using GBrowse
Gene Graph
Gene Plot of ZK836.1 Browse using GBrowse
Gene Graph