Link to ZK938.5RNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to C08H9.5geneMap Link to C08H9.5RNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to ZK938.5geneMap
Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 
RNAi Experiment: JA:ZK938.5 Ace View of JA:ZK938.5
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  ZK938.5 (old-2)
Description of "ZK938.5"  old-2 encodes a transmembrane protein tyrosine kinase (also known as 'kin-28') that affects mean and maximum life span with multiple paralogs in C. elegans; the expression of old-2 was experimentally verified by RT-PCR.
KOG Annotation  Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (II:9848040..9849096)
Transcript overlap: 767 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 644
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.864
Wormbase (BLAST) RNAi primary
External "ZK938.5" Links  Wormbase NCBI
Gene Inhibited  C08H9.5 (old-1)
Description of "C08H9.5"  Associated GO Term : protein kinase activity
KOG Annotation  Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 101
Relative score: 0.157 (Best raw score= for Gene )
Specificity index: 0.136
Wormbase (BLAST) RNAi secondary
External "C08H9.5" Links  Wormbase NCBI
JA:ZK938.5 Phenotypes Help with Phenotypes
Phenotype  WT
JA:ZK938.5 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_ZK938.5 (PCR_reagent)
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
Date  2003-1-10
Gene Plot of C08H9.5 Browse using GBrowse
Gene Graph
Gene Plot of ZK938.5 Browse using GBrowse
Gene Graph