Link to Y39G10AL.3.1Link to Y39G10AL.3.2RNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap
Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
RNAi Experiment: MV_SV:mv_AAD38186 Ace View of MV_SV:mv_AAD38186
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y39G10AL.3 (cdk-7)
Description of "Y39G10AL.3"  The cdk-7 gene encodes a cyclin-dependent kinase orthologous to human CDK7 (OMIM:601955) that is a component of the general transcription factor IIH (TFIIH) complex; CDK-7 is required during embryogenesis for mRNA transcription and phosphorylation of RNA polymerase II on serine 2 and serine 5, as well as for cell cycle progression, maintenance of ploidy, and completion of meiosis following fertilization.
KOG Annotation  Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 822
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "Y39G10AL.3" Links  Wormbase NCBI
MV_SV:mv_AAD38186 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance None reported
MV_SV:mv_AAD38186 Experiment Details Ace View
Laboratory  MV
RNAi Reagent & Type  mv_AAD38186 (ORFeome_reagent)
Remark  bacterial-feeding RNAi began at the L1 larval stage
Reference  Rual JF et al. (2004) Genome Res "Toward Improving Caenorhabditis elegans Phenome Mapping With an ORFeome-Based ...."
Delivery Method  Bacterial_feeding
Date  2004-9-01
Gene Plot of Y39G10AL.3 Browse using GBrowse
Gene Graph