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RNAi Experiment: MV_SV:mv_AAF01679 Ace View of MV_SV:mv_AAF01679
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F43G9.9 (cpn-1)
Description of "F43G9.9"  cpn-1 encodes a calponin homolog, more closely related to calponin per se than to its paralogs transgelin (SM22 alpha) or neuronal protein NP25, that is is dispensable for viability and gross morphology in mass RNAi screens, and that has no obvious mutant phenotype in a rearrangement that probably disrupts cpn-1.
KOG Annotation  Calponin
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 513
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "F43G9.9" Links  Wormbase NCBI
MV_SV:mv_AAF01679 Phenotypes Help with Phenotypes
Phenotype  WTRNAi did not cause viable post-embryonic phenotype
MV_SV:mv_AAF01679 Experiment Details Ace View
Laboratory  MV
RNAi Reagent & Type  mv_AAF01679 (ORFeome_reagent)
Remark  bacterial-feeding RNAi began at the L1 larval stage
Reference  Rual JF et al. (2004) Genome Res "Toward Improving Caenorhabditis elegans Phenome Mapping With an ORFeome-Based ...."
Delivery Method  Bacterial_feeding
Date  2004-9-01
Gene Plot of F43G9.9 Browse using GBrowse
Gene Graph