Link to F46F3.1RNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to Y65B4BR.9Link to C28A5.4geneMap
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RNAi Experiment: MV_SV:mv_F46F3.1 Ace View of MV_SV:mv_F46F3.1
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F46F3.1 (ceh-27)
Description of "F46F3.1"  ceh-27 encodes a homeodomain protein of the NK-2 class that contains Drosophila scarecrow and human NKX-2 (OMIM:606727); CEH-27 activity is essential for embryogenesis and appears to be required for maintaining hypodermal integrity during movement as embryos lacking CEH-27 burst at a breach in the ventral hypodermis upon commencement of muscle contractions; CEH-27 expression is first detected in the ~100-cell embryo in what appear to be MS-derived cells while in later embryos expression is seen in a number of cells in the anterior head region.
KOG Annotation  Transcription factor tinman/NKX2-3, contains HOX domain
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 677
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "F46F3.1" Links  Wormbase NCBI
MV_SV:mv_F46F3.1 Phenotypes Help with Phenotypes
Phenotype  WTRNAi did not cause viable post-embryonic phenotype
MV_SV:mv_F46F3.1 Experiment Details Ace View
Laboratory  MV
RNAi Reagent & Type  mv_F46F3.1 (ORFeome_reagent)
Remark  bacterial-feeding RNAi began at the L1 larval stage
Reference  Rual JF et al. (2004) Genome Res "Toward Improving Caenorhabditis elegans Phenome Mapping With an ORFeome-Based ...."
Delivery Method  Bacterial_feeding
Date  2004-9-01
Gene Plot of F46F3.1 Browse using GBrowse
Gene Graph