RNAi Experiment: MV_SV:mv_F57B7.3 |
Ace View of MV_SV:mv_F57B7.3
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Genes Inhibited |
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Gene Inhibited |
C50B6.4 (col-161) |
Description of "C50B6.4" |
Associated GO Term : structural constituent of cuticle |
KOG Annotation  |
Collagens (type IV and type XIII), and related proteins
|
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Evidence for Inhibition |
Sliding Window |
Raw score: 185
Relative score: 0.225 (Best raw score= for Gene )
Specificity index: 0.081 |
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External "C50B6.4" Links |
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Gene Inhibited |
F57B7.3 (col-156) |
Description of "F57B7.3" |
Associated GO Term : structural constituent of cuticle |
KOG Annotation  |
Collagens (type IV and type XIII), and related proteins
|
 |
Evidence for Inhibition |
Sliding Window |
Raw score: 822
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.359 |
Wormbase (BLAST) |
RNAi primary |
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External "F57B7.3" Links |
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Gene Inhibited |
B0222.7 (col-145) |
Description of "B0222.7" |
Associated GO Term : structural constituent of cuticle |
KOG Annotation  |
Collagens (type IV and type XIII), and related proteins
|
 |
Evidence for Inhibition |
Sliding Window |
Raw score: 462
Relative score: 0.562 (Best raw score= for Gene )
Specificity index: 0.202 |
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External "B0222.7" Links |
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Gene Inhibited |
Y2H9A.3 (col-162) |
Description of "Y2H9A.3" |
Associated GO Term : structural constituent of cuticle |
KOG Annotation  |
Collagens (type IV and type XIII), and related proteins
|
 |
Evidence for Inhibition |
Sliding Window |
Raw score: 206
Relative score: 0.251 (Best raw score= for Gene )
Specificity index: 0.09 |
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External "Y2H9A.3" Links |
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Gene Inhibited |
B0222.6 (col-144) |
Description of "B0222.6" |
Associated GO Term : structural constituent of cuticle |
KOG Annotation  |
Collagens (type IV and type XIII), and related proteins
|
 |
Evidence for Inhibition |
Sliding Window |
Raw score: 166
Specificity index: 0.072 |
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External "B0222.6" Links |
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Gene Inhibited |
B0222.8 (col-10) |
Description of "B0222.8" |
col-10 encodes a collagen protein; expressed exclusively in hypodermal cells |
KOG Annotation  |
Collagens (type IV and type XIII), and related proteins
|
 |
Evidence for Inhibition |
Sliding Window |
Raw score: 166
Relative score: 0.202 (Best raw score= for Gene )
Specificity index: 0.072 |
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External "B0222.8" Links |
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Gene Inhibited |
F08G5.4 (col-130) |
Description of "F08G5.4" |
Associated GO Term : structural constituent of cuticle |
KOG Annotation  |
Collagens (type IV and type XIII), and related proteins
|
 |
Evidence for Inhibition |
Sliding Window |
Raw score: 173
Relative score: 0.21 (Best raw score= for Gene )
Specificity index: 0.076 |
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External "F08G5.4" Links |
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Gene Inhibited |
C09G5.4 (col-39) |
Description of "C09G5.4" |
col-39 encodes a collagen that is individually dispensable for viability and gross morphology in mass RNAi screens; the amino- and carboxyl-terminal cysteine-rich regions of COL-39 are most closely related to those of COL-8, COL-19, and COL-35. |
KOG Annotation  |
Collagens (type IV and type XIII), and related proteins
|
 |
Evidence for Inhibition |
Sliding Window |
Raw score: 110
Relative score: 0.134 (Best raw score= for Gene )
Specificity index: 0.048 |
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External "C09G5.4" Links |
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MV_SV:mv_F57B7.3 Phenotypes |
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Phenotype |
WTRNAi did not cause viable post-embryonic phenotype
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MV_SV:mv_F57B7.3 Experiment Details |
Ace View |
Laboratory |
MV |
RNAi Reagent & Type |
mv_F57B7.3 (ORFeome_reagent) |
Remark |
bacterial-feeding RNAi began at the L1 larval stage |
Reference |
Rual JF et al. (2004) Genome Res "Toward Improving Caenorhabditis elegans Phenome Mapping With an ORFeome-Based ...." |
Delivery Method |
Bacterial_feeding |
Date |
2004-9-01 |
Gene Plot of C50B6.4 |
Browse using GBrowse
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Gene Plot of B0222.8 |
Browse using GBrowse
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Gene Plot of F08G5.4 |
Browse using GBrowse
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Gene Plot of F57B7.3 |
Browse using GBrowse
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Gene Plot of B0222.7 |
Browse using GBrowse
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Gene Plot of Y2H9A.3 |
Browse using GBrowse
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Gene Plot of B0222.6 |
Browse using GBrowse
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Gene Plot of C09G5.4 |
Browse using GBrowse
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