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RNAi Experiment: MV_SV:mv_G_YK1558 Ace View of MV_SV:mv_G_YK1558
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y49E10.1 (rpt-6)
Description of "Y49E10.1"  rpt-6 encodes a triple A ATPase that is a subunit of the 26S proteasome 19S regulatory particle (RP) base subcomplex; RPT-6 is required for embryonic and larval development and by homology, is predicted to function in unfolding protein substrates and translocating them into the core proteolytic particle (CP) of the proteasome.
KOG Annotation  26S proteasome regulatory complex, ATPase RPT6
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 1185
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.926
Wormbase (BLAST) RNAi primary
External "Y49E10.1" Links  Wormbase NCBI
Gene Inhibited  Y37H9A.4
Evidence for Inhibition 
Sliding Window Raw score: 95
Relative score: 0.08 (Best raw score= for Gene )
Specificity index: 0.074
External "Y37H9A.4" Links  Wormbase NCBI
MV_SV:mv_G_YK1558 Phenotypes Help with Phenotypes
Phenotype  WTRNAi did not cause viable post-embryonic phenotype
MV_SV:mv_G_YK1558 Experiment Details Ace View
Laboratory  MV
RNAi Reagent & Type  mv_G_YK1558 (ORFeome_reagent)
Remark  bacterial-feeding RNAi began at the L1 larval stage
Reference  Rual JF et al. (2004) Genome Res "Toward Improving Caenorhabditis elegans Phenome Mapping With an ORFeome-Based ...."
Delivery Method  Bacterial_feeding
Date  2004-9-01
Gene Plot of Y49E10.1 Browse using GBrowse
Gene Graph
Gene Plot of Y37H9A.4 Browse using GBrowse
Gene Graph