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RNAi Experiment: MV_SV:mv_G_YK2151 Ace View of MV_SV:mv_G_YK2151
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y39E4A.3
Description of "Y39E4A.3"  Y39E4A.3 is orthologous to the human gene MAPLE SYRUP URINE DISEASE, TYPE IA (MSUD, TYPE IA; E1-alpha subunit of branched-chain keto acid dehydrogenase; OMIM:248600), which when mutated leads to maple syrup urine disease; Y39E4A.3 protein is predicted to be mitochondrial.
Evidence for Inhibition 
Sliding Window Raw score: 1188
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.915
Wormbase (BLAST) RNAi primary
External "Y39E4A.3" Links  Wormbase NCBI
Gene Inhibited  Y43F4A.4
KOG Annotation  Branched chain alpha-keto acid dehydrogenase complex, alpha subunit
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 111
Relative score: 0.093 (Best raw score= for Gene )
Specificity index: 0.085
Wormbase (BLAST) RNAi primary
External "Y43F4A.4" Links  Wormbase NCBI
MV_SV:mv_G_YK2151 Phenotypes Help with Phenotypes
Phenotype  WTRNAi did not cause viable post-embryonic phenotype
MV_SV:mv_G_YK2151 Experiment Details Ace View
Laboratory  MV
RNAi Reagent & Type  mv_G_YK2151 (ORFeome_reagent)
Remark  bacterial-feeding RNAi began at the L1 larval stage
Reference  Rual JF et al. (2004) Genome Res "Toward Improving Caenorhabditis elegans Phenome Mapping With an ORFeome-Based ...."
Delivery Method  Bacterial_feeding
Date  2004-9-01
Gene Plot of Y39E4A.3 Browse using GBrowse
Gene Graph
Gene Plot of Y43F4A.4 Browse using GBrowse
Gene Graph