Link to F45F2.5Link to F45F2.12Link to F45F2.4RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to F07B7.11Link to F07B7.3RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to K06C4.4Link to K06C4.11RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to F07B7.4RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to F45F2.2RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to K06C4.12RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to T10C6.11Link to T10C6.12RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap
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RNAi Experiment: MV_SV:mv_T10C6.11 Ace View of MV_SV:mv_T10C6.11
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F45F2.12 (his-8)
Description of "F45F2.12"  his-8 encodes an H2B histone; his-8 is contained within the histone gene cluster HIS2.
Evidence for Inhibition 
Sliding Window Raw score: 213
Relative score: 0.53 (Best raw score= for Gene )
Specificity index: 0.114
Wormbase (BLAST) RNAi primary
External "F45F2.12" Links  Wormbase NCBI
Gene Inhibited  F07B7.11 (his-54)
Description of "F07B7.11"  his-54 encodes an H2B histone; by homology, HIS-54 is predicted to function as a nucleosome component required for packaging of DNA into chromatin.
Evidence for Inhibition 
Sliding Window Raw score: 292
Specificity index: 0.156
Wormbase (BLAST) RNAi primary
External "F07B7.11" Links  Wormbase NCBI
Gene Inhibited  K06C4.4 (his-20)
Description of "K06C4.4"  his-20 encodes an H2B histone; by homology, HIS-20 is predicted to function as a nucleosome component required for packaging of DNA into chromatin.
Evidence for Inhibition 
Sliding Window Raw score: 257
Specificity index: 0.137
Wormbase (BLAST) RNAi primary
External "K06C4.4" Links  Wormbase NCBI
Gene Inhibited  F07B7.4 (his-52)
Description of "F07B7.4"  his-52 encodes an H2B histone.
KOG Annotation  Histone H2B
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 292
Relative score: 0.726 (Best raw score= for Gene )
Specificity index: 0.156
Wormbase (BLAST) RNAi primary
External "F07B7.4" Links  Wormbase NCBI
Gene Inhibited  F45F2.2 (his-39)
Description of "F45F2.2"  his-39 encodes an H2B histone; by homology, HIS-39 is predicted to function as a nucleosome component required for packaging of DNA into chromatin; loss of his-39 function via RNA-mediated interference (RNAi) does not result in any abnormalities; his-39 is a replication-dependent histone locus that resides in the HIS2 cluster on chromosome V.
KOG Annotation  Histone H2B
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 160
Relative score: 0.398 (Best raw score= for Gene )
Specificity index: 0.085
Wormbase (BLAST) RNAi primary
External "F45F2.2" Links  Wormbase NCBI
Gene Inhibited  K06C4.12 (his-22)
Description of "K06C4.12"  his-22 encodes an H2B histone.
Evidence for Inhibition 
Sliding Window Raw score: 257
Relative score: 0.639 (Best raw score= for Gene )
Specificity index: 0.137
Wormbase (BLAST) RNAi primary
External "K06C4.12" Links  Wormbase NCBI
Gene Inhibited  T10C6.11 (his-4)
Description of "T10C6.11"  his-4 encodes an H2B histone.
KOG Annotation  Histone H2B
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 402
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.215
Wormbase (BLAST) RNAi primary
External "T10C6.11" Links  Wormbase NCBI
MV_SV:mv_T10C6.11 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance None reported
MV_SV:mv_T10C6.11 Experiment Details Ace View
Laboratory  MV
RNAi Reagent & Type  mv_T10C6.11 (ORFeome_reagent)
Remark  bacterial-feeding RNAi began at the L1 larval stage
Reference  Rual JF et al. (2004) Genome Res "Toward Improving Caenorhabditis elegans Phenome Mapping With an ORFeome-Based ...."
Delivery Method  Bacterial_feeding
Date  2004-9-01
Gene Plot of F45F2.12 Browse using GBrowse
Gene Graph
Gene Plot of F07B7.11 Browse using GBrowse
Gene Graph
Gene Plot of F45F2.2 Browse using GBrowse
Gene Graph
Gene Plot of F07B7.4 Browse using GBrowse
Gene Graph
Gene Plot of K06C4.4 Browse using GBrowse
Gene Graph
Gene Plot of T10C6.11 Browse using GBrowse
Gene Graph
Gene Plot of K06C4.12 Browse using GBrowse
Gene Graph