Link to C29F9.11RNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to T12B5.8Link to ZC47.12Link to T12B5.10Link to T12B5.6geneMap Link to F07G6.7RNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to T12B5.6Link to T12B5.1geneMap Link to Y57E12AL.2RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi 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Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 
RNAi Experiment: MV_SV:mv_T12B5.6 Ace View of MV_SV:mv_T12B5.6
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  C29F9.11
Evidence for Inhibition 
Sliding Window Raw score: 109
Relative score: 0.057 (Best raw score= for Gene )
Specificity index: 0.014
Wormbase (BLAST) RNAi secondary
External "C29F9.11" Links  Wormbase NCBI
Gene Inhibited  F07G6.7
Evidence for Inhibition 
Sliding Window Raw score: 233
Relative score: 0.121 (Best raw score= for Gene )
Specificity index: 0.029
External "F07G6.7" Links  Wormbase NCBI
Gene Inhibited  Y57E12AL.3
Evidence for Inhibition 
Sliding Window Raw score: 989
Relative score: 0.513 (Best raw score= for Gene )
Specificity index: 0.123
Wormbase (BLAST) RNAi primary
External "Y57E12AL.3" Links  Wormbase NCBI
Gene Inhibited  T06A1.6
Evidence for Inhibition 
Sliding Window Raw score: 437
Relative score: 0.227 (Best raw score= for Gene )
Specificity index: 0.054
Wormbase (BLAST) RNAi primary
External "T06A1.6" Links  Wormbase NCBI
Gene Inhibited  C29F9.10
Evidence for Inhibition 
Sliding Window Raw score: 122
Relative score: 0.063 (Best raw score= for Gene )
Specificity index: 0.015
Wormbase (BLAST) RNAi primary
External "C29F9.10" Links  Wormbase NCBI
Gene Inhibited  T12B5.10
Description of "T12B5.10"  This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction.
Evidence for Inhibition 
Sliding Window Raw score: 118
Relative score: 0.061 (Best raw score= for Gene )
Specificity index: 0.015
External "T12B5.10" Links  Wormbase NCBI
Gene Inhibited  Y40H7A.2
Evidence for Inhibition 
Sliding Window Raw score: 112
Relative score: 0.058 (Best raw score= for Gene )
Specificity index: 0.014
Wormbase (BLAST) RNAi primary
External "Y40H7A.2" Links  Wormbase NCBI
Gene Inhibited  T12B5.6
Description of "T12B5.6"  This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction.
Evidence for Inhibition 
Sliding Window Raw score: 1926
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.24
Wormbase (BLAST) RNAi primary
External "T12B5.6" Links  Wormbase NCBI
Gene Inhibited  D1054.4
Evidence for Inhibition 
Sliding Window Raw score: 912
Relative score: 0.474 (Best raw score= for Gene )
Specificity index: 0.114
Wormbase (BLAST) RNAi primary
External "D1054.4" Links  Wormbase NCBI
Gene Inhibited  H28G03.5
Evidence for Inhibition 
Sliding Window Raw score: 901
Relative score: 0.468 (Best raw score= for Gene )
Specificity index: 0.112
Wormbase (BLAST) RNAi primary
External "H28G03.5" Links  Wormbase NCBI
Gene Inhibited  B0280.6
Evidence for Inhibition 
Sliding Window Raw score: 664
Relative score: 0.345 (Best raw score= for Gene )
Specificity index: 0.083
Wormbase (BLAST) RNAi primary
External "B0280.6" Links  Wormbase NCBI
Gene Inhibited  Y68A4A.4
Evidence for Inhibition 
Sliding Window Raw score: 902
Relative score: 0.468 (Best raw score= for Gene )
Specificity index: 0.112
Wormbase (BLAST) RNAi primary
External "Y68A4A.4" Links  Wormbase NCBI
Gene Inhibited  T12B5.7
Evidence for Inhibition 
Sliding Window Raw score: 530
Relative score: 0.275 (Best raw score= for Gene )
Specificity index: 0.066
External "T12B5.7" Links  Wormbase NCBI
Gene Inhibited  T12B5.8
Description of "T12B5.8"  This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction.
Evidence for Inhibition 
Sliding Window Raw score: 64
Relative score: 0.033 (Best raw score= for Gene )
Specificity index: 0.008
Wormbase (BLAST) RNAi secondary
External "T12B5.8" Links  Wormbase NCBI
MV_SV:mv_T12B5.6 Phenotypes Help with Phenotypes
Phenotype  WTRNAi did not cause viable post-embryonic phenotype
MV_SV:mv_T12B5.6 Experiment Details Ace View
Laboratory  MV
RNAi Reagent & Type  mv_T12B5.6 (ORFeome_reagent)
Remark  bacterial-feeding RNAi began at the L1 larval stage
Reference  Rual JF et al. (2004) Genome Res "Toward Improving Caenorhabditis elegans Phenome Mapping With an ORFeome-Based ...."
Delivery Method  Bacterial_feeding
Date  2004-9-01
Gene Plot of C29F9.11 Browse using GBrowse
Gene Graph
Gene Plot of Y57E12AL.3 Browse using GBrowse
Gene Graph
Gene Plot of F07G6.7 Browse using GBrowse
Gene Graph
Gene Plot of T12B5.10 Browse using GBrowse
Gene Graph
Gene Plot of C29F9.10 Browse using GBrowse
Gene Graph
Gene Plot of T06A1.6 Browse using GBrowse
Gene Graph
Gene Plot of T12B5.6 Browse using GBrowse
Gene Graph
Gene Plot of Y40H7A.2 Browse using GBrowse
Gene Graph
Gene Plot of D1054.4 Browse using GBrowse
Gene Graph
Gene Plot of B0280.6 Browse using GBrowse
Gene Graph
Gene Plot of H28G03.5 Browse using GBrowse
Gene Graph
Gene Plot of Y68A4A.4 Browse using GBrowse
Gene Graph
Gene Plot of T12B5.8 Browse using GBrowse
Gene Graph
Gene Plot of T12B5.7 Browse using GBrowse
Gene Graph