Link to T06E4.6Link to T06E4.5RNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi 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Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 
RNAi Experiment: MV_SV:mv_T15B7.5 Ace View of MV_SV:mv_T15B7.5
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  T06E4.6 (col-146)
Description of "T06E4.6"  Associated GO Term : structural constituent of cuticle
KOG Annotation  Collagens (type IV and type XIII), and related proteins
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 237
Relative score: 0.27 (Best raw score= for Gene )
Specificity index: 0.17
External "T06E4.6" Links  Wormbase NCBI
Gene Inhibited  Y41E3.2 (dpy-4)
Description of "Y41E3.2"  dpy-4 is an uncloned gene required for normal body length; dpy-4 was first identified with the mutagen ICR.
KOG Annotation  Collagens (type IV and type XIII), and related proteins
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 116
Relative score: 0.132 (Best raw score= for Gene )
Specificity index: 0.083
External "Y41E3.2" Links  Wormbase NCBI
Gene Inhibited  C44C10.1 (col-180)
Description of "C44C10.1"  Associated GO Term : structural constituent of cuticle
KOG Annotation  Collagens (type IV and type XIII), and related proteins
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 163
Relative score: 0.185 (Best raw score= for Gene )
Specificity index: 0.117
External "C44C10.1" Links  Wormbase NCBI
Gene Inhibited  T15B7.5 (col-141)
Description of "T15B7.5"  Associated GO Term : structural constituent of cuticle
KOG Annotation  Collagens (type IV and type XIII), and related proteins
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 879
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.63
Wormbase (BLAST) RNAi primary
External "T15B7.5" Links  Wormbase NCBI
MV_SV:mv_T15B7.5 Phenotypes Help with Phenotypes
Phenotype  WTRNAi did not cause viable post-embryonic phenotype
MV_SV:mv_T15B7.5 Experiment Details Ace View
Laboratory  MV
RNAi Reagent & Type  mv_T15B7.5 (ORFeome_reagent)
Remark  bacterial-feeding RNAi began at the L1 larval stage
Reference  Rual JF et al. (2004) Genome Res "Toward Improving Caenorhabditis elegans Phenome Mapping With an ORFeome-Based ...."
Delivery Method  Bacterial_feeding
Date  2004-9-01
Gene Plot of Y41E3.2 Browse using GBrowse
Gene Graph
Gene Plot of T06E4.6 Browse using GBrowse
Gene Graph
Gene Plot of T15B7.5 Browse using GBrowse
Gene Graph
Gene Plot of C44C10.1 Browse using GBrowse
Gene Graph