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RNAi Experiment: MV_SV:mv_Y110A7A.1 Ace View of MV_SV:mv_Y110A7A.1
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y110A7A.1 (hcp-6)
Description of "Y110A7A.1"  hcp-6 encodes a HEAT motif-containing protein that displays similarity to the XCAP-D2/CNAP1/Cnd1/YCS4 family of proteins that are homologous to the condensin complex subunit 1; HCP-6 activity is required during mitosis for some aspects of mitotic chromosome condensation, attachment of microtubules to kinetochores, mitotic chromosome alignment, and mitotic sister chromatid segregation; during interphase, HCP-6 is detectable in a punctate pattern in the nucleoplasm; at prophase, HCP-6 becomes associated with condensed chromosomes, colocalizing with the centromeric component HCP-3; HCP-6 localization to chromosomes depends upon the activity of HCP-3 and HCP-4, a C. elegans CENP-C-like protein.
KOG Annotation  Uncharacterized conserved protein related to condensin complex subunit 1
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 4925
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "Y110A7A.1" Links  Wormbase NCBI
MV_SV:mv_Y110A7A.1 Phenotypes Help with Phenotypes
Phenotype  WTRNAi did not cause viable post-embryonic phenotype
MV_SV:mv_Y110A7A.1 Experiment Details Ace View
Laboratory  MV
RNAi Reagent & Type  mv_Y110A7A.1 (ORFeome_reagent)
Remark  bacterial-feeding RNAi began at the L1 larval stage
Reference  Rual JF et al. (2004) Genome Res "Toward Improving Caenorhabditis elegans Phenome Mapping With an ORFeome-Based ...."
Delivery Method  Bacterial_feeding
Date  2004-9-01
Gene Plot of Y110A7A.1 Browse using GBrowse
Gene Graph