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RNAi Experiment: PF:GL1_1G7 Ace View of PF:GL1_1G7
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  C27A2.6 (dsh-2)
Description of "C27A2.6"  dsh-2 encodes a protein containing a DIX domain, a DEP domain, and a PDZ domain that is required for embryonic viability and functions in Wnt pathway signaling between the embryonic blastomeres P2 and EMS with respect to endoderm specification and to orient the division axis of the EMS cell; expressed from the four-cell embryo stage, and is primarily associated with membranes.
KOG Annotation  Dishevelled 3 and related proteins
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (II:5079955..5081139)
Transcript overlap: 964 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 859
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "C27A2.6" Links  Wormbase NCBI
PF:GL1_1G7 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance 50 - 70 %
Larval  Lva Observed in >=10% of progeny.
Adult  Sck Observed in >=10% of progeny.
Stp Observed in >=10% of progeny.
PF:GL1_1G7 Experiment Details Ace View
Laboratory  KK
RNAi Reagent & Type  sjj_C27A2.6 (PCR_reagent)
Remark  PCR product contains flanking T7 promoter sequences
Reference  Piano et al. (2002) Curr Biol "Gene Clustering Based on RNAi Phenotypes of Ovary-Enriched Genes in C. elegans"
Delivery Method  Injection
Date  2002-11-19
Gene Plot of C27A2.6 Browse using GBrowse
Gene Graph