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RNAi Experiment: PF:GL1_2B12 Ace View of PF:GL1_2B12
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  W02D9.1 (pri-2)
Description of "W02D9.1"  pri-2 encodes a homolog of the DNA polymerase alpha-primase subunit C that is required in embryos for the normal timing of embryonic cell divisions (much as DIV-1 is) and for normal mitosis in the germline.
KOG Annotation  Eukaryotic-type DNA primase, large subunit
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (I:12530901..12532082)
Transcript overlap: 712 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 649
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "W02D9.1" Links  Wormbase NCBI
PF:GL1_2B12 Phenotypes Run Phenoblast! Run Phenoblast Help with Phenotypes
Embryonic  Emb Penetrance 100 %
Phenotype  Aberrant AB or P1 spindle orientation
Aberrant cell-cell contacts at the four-cell stage
Ectopic cleavage furrows
Exaggerated asynchrony
Excessive blebbing
Multiple cavities
Multiple nuclei in 1, 2, or 4-cell embryos
Polar body reabsorbed
Slow cell cycle
Movies/Stacks/Images  /static/images/movie.gif /static/images/movie.gif /static/images/movie.gif /static/images/movie.gif /static/images/movie.gif /static/images/movie.gif Help
PF:GL1_2B12 Experiment Details Ace View
Laboratory  KK
RNAi Reagent & Type  sjj_W02D9.1 (PCR_reagent)
Remark  PCR product contains flanking T7 promoter sequences
Reference  Piano et al. (2002) Curr Biol "Gene Clustering Based on RNAi Phenotypes of Ovary-Enriched Genes in C. elegans"
Delivery Method  Injection
Date  2002-11-19
Gene Plot of W02D9.1 Browse using GBrowse
Gene Graph