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RNAi Experiment: PF:GL1_2G3 Ace View of PF:GL1_2G3
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  K08E3.6 (cyk-4)
Description of "K08E3.6"  cyk-4 encodes a GTPase activating protein (GAP) for the Rho family of GTPases that, together with ZEN-4, is sufficient to promote the formation of the large bundles of microtubules that form the central spindle during anaphase, and is required for fertility and coordinated locomotion postembryonically; localizes to the central spindle during anaphase interdependently with ZEN-4, and interacts with ZEN-4 in vitro and in vivo.
KOG Annotation  GTPase-activating protein
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (III:13769668..13770809)
Transcript overlap: 928 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 844
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "K08E3.6" Links  Wormbase NCBI
PF:GL1_2G3 Phenotypes Run Phenoblast! Run Phenoblast Help with Phenotypes
Embryonic  Emb Penetrance 80 - 100 %
Phenotype  Cytokinesis defect
Ectopic cleavage furrows
Multiple nuclei in 1, 2, or 4-cell embryos
P0 spindle positioning defect
Pronuclear breakdown asynchronous
Pronuclei fail to migrate
Pronuclei meet more centrally
Pseudocleavage absent
Movies/Stacks/Images  /static/images/movie.gif /static/images/movie.gif /static/images/movie.gif Help
PF:GL1_2G3 Experiment Details Ace View
Laboratory  KK
RNAi Reagent & Type  sjj_K08E3.6 (PCR_reagent)
Remark  PCR product contains flanking T7 promoter sequences
Reference  Piano et al. (2002) Curr Biol "Gene Clustering Based on RNAi Phenotypes of Ovary-Enriched Genes in C. elegans"
Delivery Method  Injection
Date  2002-11-19
Gene Plot of K08E3.6 Browse using GBrowse
Gene Graph