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RNAi Experiment: PF:GL1_4H9 Ace View of PF:GL1_4H9
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  C52E4.4 (rpt-1)
Description of "C52E4.4"  rpt-1 encodes a predicted ATPase subunit of the 19S regulatory complex of the proteasome that affects fertility and embryonic viability.
KOG Annotation  26S proteasome regulatory complex, ATPase RPT1
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (V:11983416..11984585)
Transcript overlap: 910 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 847
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "C52E4.4" Links  Wormbase NCBI
PF:GL1_4H9 Phenotypes Run Phenoblast! Run Phenoblast Help with Phenotypes
Embryonic  Emb Penetrance 100 %
Adult  Ste
No developing embryos seen 48 hours after dsRNA injection
Reduced fecundity of injected worm
Movies/Stacks/Images  /static/images/movie.gif Help
PF:GL1_4H9 Experiment Details Ace View
Laboratory  KK
RNAi Reagent & Type  sjj_C52E4.4 (PCR_reagent)
Remark  PCR product contains flanking T7 promoter sequences
Reference  Piano et al. (2002) Curr Biol "Gene Clustering Based on RNAi Phenotypes of Ovary-Enriched Genes in C. elegans"
Delivery Method  Injection
Date  2002-11-19
Gene Plot of C52E4.4 Browse using GBrowse
Gene Graph