Link to C17E4.5RNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentgeneMap
Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
RNAi Experiment: PF:GL1_5C5 Ace View of PF:GL1_5C5
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  C17E4.5 (pab-3)
Description of "C17E4.5"  pab-3 is orthologous to human PABPN1 (OMIM:602279, mutated in oculopharyngeal muscular dystrophy).
KOG Annotation  Splicing factor RNPS1, SR protein superfamily
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (I:9420977..9422152)
Transcript overlap: 905 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 842
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "C17E4.5" Links  Wormbase NCBI
PF:GL1_5C5 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance 30 - 50 % Sle
Larval  Gro Observed in >=10% of progeny.
Lva Observed in <10% of progeny.
Adult  Unc Observed in >=10% of progeny.
PF:GL1_5C5 Experiment Details Ace View
Laboratory  KK
RNAi Reagent & Type  sjj_C17E4.5 (PCR_reagent)
Remark  PCR product contains flanking T7 promoter sequences
Reference  Piano et al. (2002) Curr Biol "Gene Clustering Based on RNAi Phenotypes of Ovary-Enriched Genes in C. elegans"
Delivery Method  Injection
Date  2002-11-19
Gene Plot of C17E4.5 Browse using GBrowse
Gene Graph