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RNAi Experiment: PF:GL1_5D6 Ace View of PF:GL1_5D6
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  C34E10.2 (gop-2)
Description of "C34E10.2"  gop-2 encodes a member of the conserved hypothetical ATP binding protein family that affects embryonic viability, growth, and fertility.
KOG Annotation  GTPase XAB1, interacts with DNA repair protein XPA
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (III:5259324..5260342)
Transcript overlap: 772 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 688
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "C34E10.2" Links  Wormbase NCBI
PF:GL1_5D6 Phenotypes Run Phenoblast! Run Phenoblast Help with Phenotypes
Embryonic  Emb Penetrance 80 - 100 %
Larval  Gro Observed in >=10% of progeny.
Lva Observed in >=10% of progeny.
Adult  Stp Observed in >=10% of progeny.
Phenotype  Large cytoplasmic granules
Movies/Stacks/Images  /static/images/movie.gif /static/images/movie.gif /static/images/movie.gif Help
PF:GL1_5D6 Experiment Details Ace View
Laboratory  KK
RNAi Reagent & Type  sjj_C34E10.2 (PCR_reagent)
Remark  PCR product contains flanking T7 promoter sequences
Reference  Piano et al. (2002) Curr Biol "Gene Clustering Based on RNAi Phenotypes of Ovary-Enriched Genes in C. elegans"
Delivery Method  Injection
Date  2002-11-19
Gene Plot of C34E10.2 Browse using GBrowse
Gene Graph