Link to F40F9.6b.2Link to F40F9.6b.1Link to F40F9.6aRNAiRNAiRNAi ReagentRNAi ReagentgeneMap
Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 
RNAi Experiment: PF:GL1_5H5 Ace View of PF:GL1_5H5
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F40F9.6
Description of "F40F9.6"  Associated GO Term : hydrolase activity, hydrolyzing O-glycosyl compounds
KOG Annotation  Glucosidase II catalytic (alpha) subunit and related enzymes, glycosyl hydrolase family 31
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (V:9731267..9732338)
Transcript overlap: 729 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 645
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "F40F9.6" Links  Wormbase NCBI
PF:GL1_5H5 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance 17 %
Larval  Lva Observed in >=10% of progeny.
PF:GL1_5H5 Experiment Details Ace View
Laboratory  KK
RNAi Reagent & Type  sjj_F40F9.6 (PCR_reagent)
Remark  PCR product contains flanking T7 promoter sequences
Reference  Piano et al. (2002) Curr Biol "Gene Clustering Based on RNAi Phenotypes of Ovary-Enriched Genes in C. elegans"
Delivery Method  Injection
Date  2002-11-19
Gene Plot of F40F9.6 Browse using GBrowse
Gene Graph