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RNAi Experiment: PF:GL1_6D8 Ace View of PF:GL1_6D8
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  M106.1 (mix-1)
Description of "M106.1"  The mix-1 gene encodes a homolog of SMC2 involved in chromosome segregation, X-chromosome gene regulation, and repression of X-linked genes during dosage compensation.
KOG Annotation  Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E)
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (II:10824270..10825452)
Transcript overlap: 938 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 875
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "M106.1" Links  Wormbase NCBI
PF:GL1_6D8 Phenotypes Run Phenoblast! Run Phenoblast Help with Phenotypes
Embryonic  Emb Penetrance 100 %
Phenotype  Aberrant cell-cell contacts at the four-cell stage
Aberrant nuclear reassembly
Abnormal size of pronucleus
Cytokinesis defect
Ectopic cleavage furrows
Nuclei reform next to cell division remnant
Polar body reabsorbed
Movies/Stacks/Images  /static/images/movie.gif /static/images/movie.gif Help
PF:GL1_6D8 Experiment Details Ace View
Laboratory  KK
RNAi Reagent & Type  sjj_M106.1 (PCR_reagent)
Remark  PCR product contains flanking T7 promoter sequences
Reference  Piano et al. (2002) Curr Biol "Gene Clustering Based on RNAi Phenotypes of Ovary-Enriched Genes in C. elegans"
Delivery Method  Injection
Date  2002-11-19
Gene Plot of M106.1 Browse using GBrowse
Gene Graph