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RNAi Experiment: PF:GL1_6F1 Ace View of PF:GL1_6F1
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  C06A8.4 (skr-17)
Description of "C06A8.4"  skr-17 encodes a homolog of Skp1 in S. cerevisiae, a core component of the SCF (Skp1p, Cullin, F-box) ubiquitin-ligase complex that facilitates ubiquitin-mediated protein degradation; SKR-17 has no known function in vivo, since skr-17(RNAi) animals are at least superficially normal, and SKR-17 does not appear to interact in vitro with any of the C. elegans cullin homologs.
KOG Annotation  SCF ubiquitin ligase, Skp1 component
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (II:7783548..7784655)
Transcript overlap: 743 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 701
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "C06A8.4" Links  Wormbase NCBI
PF:GL1_6F1 Phenotypes Help with Phenotypes
Phenotype  WT
PF:GL1_6F1 Experiment Details Ace View
Laboratory  KK
RNAi Reagent & Type  sjj_C06A8.4 (PCR_reagent)
Remark  PCR product contains flanking T7 promoter sequences
Reference  Piano et al. (2002) Curr Biol "Gene Clustering Based on RNAi Phenotypes of Ovary-Enriched Genes in C. elegans"
Delivery Method  Injection
Date  2002-11-19
Gene Plot of C06A8.4 Browse using GBrowse
Gene Graph