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RNAi Experiment: PF:GL1_7A12 Ace View of PF:GL1_7A12
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  T27F2.1 (skp-1)
Description of "T27F2.1"  Associated GO Term : nucleus
KOG Annotation  mRNA splicing factor/probable chromatin binding snw family nuclear protein
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (V:11648374..11649243)
Transcript overlap: 870 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 828
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "T27F2.1" Links  Wormbase NCBI
PF:GL1_7A12 Phenotypes Run Phenoblast! Run Phenoblast Help with Phenotypes
Embryonic  Emb Penetrance 100 %
Phenotype  Aberrant AB or P1 spindle orientation
Large cytoplasmic granules
Movies/Stacks/Images  /static/images/movie.gif /static/images/movie.gif /static/images/movie.gif Help
PF:GL1_7A12 Experiment Details Ace View
Laboratory  KK
RNAi Reagent & Type  sjj_T27F2.1 (PCR_reagent)
Remark  PCR product contains flanking T7 promoter sequences
Reference  Piano et al. (2002) Curr Biol "Gene Clustering Based on RNAi Phenotypes of Ovary-Enriched Genes in C. elegans"
Delivery Method  Injection
Date  2002-11-19
Gene Plot of T27F2.1 Browse using GBrowse
Gene Graph