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RNAi Experiment: PF:GL1_7C12 Ace View of PF:GL1_7C12
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  T06D8.8 (rpn-9)
Description of "T06D8.8"  rpn-9 is predicted to encode a non-ATPase subunit of the 19S regulatory complex of the proteasome that that affects body morphology, embryonic viability, locomotion, larval viability, fertility, and growth; interacts with RPN-11 in yeast two-hybrid assays.
KOG Annotation  26S proteasome regulatory complex, subunit RPN9/PSMD13
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (II:11238017..11239059)
Transcript overlap: 886 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 828
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "T06D8.8" Links  Wormbase NCBI
PF:GL1_7C12 Phenotypes Run Phenoblast! Run Phenoblast Help with Phenotypes
Embryonic  Emb Penetrance 80 - 100 %
Larval  Gro Observed in >=10% of progeny.
Lva Observed in >=10% of progeny.
Adult  Stp Observed in >=10% of progeny.
Pleiotropic
Phenotype  Delayed P0 spindle rotation
Ectopic cleavage furrows
Excessive blebbing
Multiple cavities
Nuclei reform next to cell division remnant
P0 spindle positioning defect
Polar body reabsorbed
Movies/Stacks/Images  /static/images/movie.gif /static/images/movie.gif /static/images/movie.gif Help
PF:GL1_7C12 Experiment Details Ace View
Laboratory  KK
RNAi Reagent & Type  sjj_T06D8.8 (PCR_reagent)
Remark  PCR product contains flanking T7 promoter sequences
Reference  Piano et al. (2002) Curr Biol "Gene Clustering Based on RNAi Phenotypes of Ovary-Enriched Genes in C. elegans"
Delivery Method  Injection
Date  2002-11-19
Gene Plot of T06D8.8 Browse using GBrowse
Gene Graph