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RNAi Experiment: Simmer:C17E4.5:Screen_B Ace View of Simmer:C17E4.5:Screen_B
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  C17E4.5 (pab-3)
Description of "C17E4.5"  pab-3 is orthologous to human PABPN1 (OMIM:602279, mutated in oculopharyngeal muscular dystrophy).
KOG Annotation  Splicing factor RNPS1, SR protein superfamily
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (I:9420977..9422152)
Transcript overlap: 905 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 842
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "C17E4.5" Links  Wormbase NCBI
Simmer:C17E4.5:Screen_B Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance 20 - 40 %
Larval  Lva
Adult  Unc
Simmer:C17E4.5:Screen_B Experiment Details Ace View
Laboratory  NL
RNAi Reagent & Type  sjj_C17E4.5 (PCR_reagent)
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Date  2003-10-01
Gene Plot of C17E4.5 Browse using GBrowse
Gene Graph