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RNAi Experiment: Simmer:C23G10.4 Ace View of Simmer:C23G10.4
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  C23G10.4 (rpn-2)
Description of "C23G10.4"  rpn-2 encodes a non-ATPase subunit of the 26S proteasome's 19S regulatory paritcle (RP) base subcomplex; RPN-2 is required for embryonic, larval, and germline development and by homology, is predicted to function in unfolding and recognition of protein substrates and/or recycling of ubiquitin moieties during protein degradation; RPN-2 is expressed sporadically at all stages of development in the pharynx, intestine, body wall muscle, somatic gonad, neurons, and hypodermis.
KOG Annotation  26S proteasome regulatory complex, subunit RPN2/PSMD1
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (III:6199314..6200382)
Transcript overlap: 973 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 910
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "C23G10.4" Links  Wormbase NCBI
Simmer:C23G10.4 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance 100 %
Simmer:C23G10.4 Experiment Details Ace View
Laboratory  NL
RNAi Reagent & Type  sjj_C23G10.4 (PCR_reagent)
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Date  2003-10-01
Gene Plot of C23G10.4 Browse using GBrowse
Gene Graph