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RNAi Experiment: Simmer:C24A11.9:Repeat_a Ace View of Simmer:C24A11.9:Repeat_a
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F27C1.6
KOG Annotation  Uncharacterized conserved protein
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (I:5420253..5421755)
Transcript overlap: 245 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 205
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.649
Wormbase (BLAST) RNAi primary
External "F27C1.6" Links  Wormbase NCBI
Gene Inhibited  C30H7.2
Description of "C30H7.2"  Associated GO Term : electron transporter activity
KOG Annotation  Thiol-disulfide isomerase and thioredoxin
What's a KOG?
Evidence for Inhibition 
ePCR Status: Top50_percentile_ePCR (I:5420253..5421755)
Transcript overlap: 132 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 111
Relative score: 0.541 (Best raw score= for Gene )
Specificity index: 0.351
External "C30H7.2" Links  Wormbase NCBI
Simmer:C24A11.9:Repeat_a Phenotypes Help with Phenotypes
Larval  Gro
Adult  Pvl
Stp
Simmer:C24A11.9:Repeat_a Experiment Details Ace View
Laboratory  NL
RNAi Reagent & Type  sjj_C24A11.9 (PCR_reagent)
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Date  2003-10-01
Gene Plot of C30H7.2 Browse using GBrowse
Gene Graph
Gene Plot of F27C1.6 Browse using GBrowse
Gene Graph