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RNAi Experiment: Simmer:C25A1.11:Screen_B Ace View of Simmer:C25A1.11:Screen_B
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  C25A1.11 (aha-1)
Description of "C25A1.11"  aha-1 encodes an ortholog of human aryl-hydrocarbon receptor nuclear translocator; interacts with AHR-1 and HIF-1 in vitro, requires HIF-1 for proper localization, and is expressed ubiquitously.
KOG Annotation  Aryl-hydrocarbon receptor nuclear translocator
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (I:10195013..10196108)
Transcript overlap: 718 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 634
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "C25A1.11" Links  Wormbase NCBI
Simmer:C25A1.11:Screen_B Phenotypes Help with Phenotypes
Larval  Gro
Phenotype  Slu
Simmer:C25A1.11:Screen_B Experiment Details Ace View
Laboratory  NL
RNAi Reagent & Type  sjj_C25A1.11 (PCR_reagent)
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Date  2003-10-01
Gene Plot of C25A1.11 Browse using GBrowse
Gene Graph