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RNAi Experiment: Simmer:C27D11.1 Ace View of Simmer:C27D11.1
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  C27D11.1 (egl-45)
Description of "C27D11.1"  egl-45 encodes a homolog of eukaryotic translation initiation factor 3, subunit 10, that affects development of the HSNs that affect egg laying.
KOG Annotation  Translation initiation factor 3, subunit a (eIF-3a)
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (III:7827550..7828660)
Transcript overlap: 797 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 713
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "C27D11.1" Links  Wormbase NCBI
Simmer:C27D11.1 Phenotypes Help with Phenotypes
Larval  Lva
Adult  Ste brood size (1 out of 5)
Simmer:C27D11.1 Experiment Details Ace View
Laboratory  NL
RNAi Reagent & Type  sjj_C27D11.1 (PCR_reagent)
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Date  2003-10-01
Gene Plot of C27D11.1 Browse using GBrowse
Gene Graph