Link to C33A12.1RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentgeneMap Link to C26E6.11RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to F37D6.1RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap
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RNAi Experiment: Simmer:C33A12.1 Ace View of Simmer:C33A12.1
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  C33A12.1
Description of "C33A12.1"  Associated GO Term : oxidoreductase activity, acting on NADH or NADPH
KOG Annotation  NADH:ubiquinone oxidoreductase, NDUFA5/B13 subunit
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (IV:9523517..9525094)
Transcript overlap: 540 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 477
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.633
Wormbase (BLAST) RNAi primary
External "C33A12.1" Links  Wormbase NCBI
Gene Inhibited  C26E6.11 (tag-339)
Evidence for Inhibition 
Sliding Window Raw score: 213
Relative score: 0.447 (Best raw score= for Gene )
Specificity index: 0.282
Wormbase (BLAST) RNAi primary
External "C26E6.11" Links  Wormbase NCBI
Gene Inhibited  F37D6.1 (mus-101)
Description of "F37D6.1"  Associated GO Term : intracellular
KOG Annotation  Nucleotide excision repair factor NEF2, RAD4/CUT5 component
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 64
Relative score: 0.134 (Best raw score= for Gene )
Specificity index: 0.085
Wormbase (BLAST) RNAi secondary
External "F37D6.1" Links  Wormbase NCBI
Simmer:C33A12.1 Phenotypes Help with Phenotypes
Larval  Lva
Simmer:C33A12.1 Experiment Details Ace View
Laboratory  NL
RNAi Reagent & Type  sjj_C33A12.1 (PCR_reagent)
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Date  2003-10-01
Gene Plot of C26E6.11 Browse using GBrowse
Gene Graph
Gene Plot of C33A12.1 Browse using GBrowse
Gene Graph
Gene Plot of F37D6.1 Browse using GBrowse
Gene Graph