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RNAi Experiment: Simmer:C34E10.2 Ace View of Simmer:C34E10.2
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  C34E10.2 (gop-2)
Description of "C34E10.2"  gop-2 encodes a member of the conserved hypothetical ATP binding protein family that affects embryonic viability, growth, and fertility.
KOG Annotation  GTPase XAB1, interacts with DNA repair protein XPA
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (III:5259324..5260342)
Transcript overlap: 772 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 688
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "C34E10.2" Links  Wormbase NCBI
Simmer:C34E10.2 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance 50 - 80 %
Larval  Gro
Adult  Pvl
Simmer:C34E10.2 Experiment Details Ace View
Laboratory  NL
RNAi Reagent & Type  sjj_C34E10.2 (PCR_reagent)
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Date  2003-10-01
Gene Plot of C34E10.2 Browse using GBrowse
Gene Graph