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RNAi Experiment: Simmer:C35D10.1 Ace View of Simmer:C35D10.1
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  C35D10.1
KOG Annotation  Predicted membrane protein
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (III:4878977..4881168)
Transcript overlap: 609 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 546
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.719
Wormbase (BLAST) RNAi primary
External "C35D10.1" Links  Wormbase NCBI
Gene Inhibited  C35D10.16 (arx-6)
Description of "C35D10.16"  Associated GO Term : actin filament polymerization
KOG Annotation  Actin-related protein Arp2/3 complex, subunit ARPC4
What's a KOG?
Evidence for Inhibition 
ePCR Status: Bottom50_percentile_ePCR (III:4878977..4881168)
Transcript overlap: 297 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 213
Relative score: 0.39 (Best raw score= for Gene )
Specificity index: 0.281
Wormbase (BLAST) RNAi primary
External "C35D10.16" Links  Wormbase NCBI
Simmer:C35D10.1 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance 50 - 80 %
Larval  Gro
Simmer:C35D10.1 Experiment Details Ace View
Laboratory  NL
RNAi Reagent & Type  sjj_C35D10.1 (PCR_reagent)
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Date  2003-10-01
Gene Plot of C35D10.1 Browse using GBrowse
Gene Graph
Gene Plot of C35D10.16 Browse using GBrowse
Gene Graph