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RNAi Experiment: Simmer:C47B2.3:Screen_B Ace View of Simmer:C47B2.3:Screen_B
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  C47B2.3 (tba-2)
Description of "C47B2.3"  tba-2 encodes a tubulin with similarity to the murine alpha-2 chain; in small scale assays tba-1(RNAi) has no phenotype and was found to function redundantly with its isotype tba-1 to form spindle structures in embryos with the tbb-1 and tbb-2 beta-isotypes.
KOG Annotation  Alpha tubulin
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (I:12965229..12966352)
Transcript overlap: 1074 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 1032
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "C47B2.3" Links  Wormbase NCBI
Simmer:C47B2.3:Screen_B Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance 100 %
Simmer:C47B2.3:Screen_B Experiment Details Ace View
Laboratory  NL
RNAi Reagent & Type  sjj_C47B2.3 (PCR_reagent)
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Date  2003-10-01
Gene Plot of C47B2.3 Browse using GBrowse
Gene Graph