Link to C50F4.13.3Link to C50F4.13.1Link to C50F4.13.2Link to C50F4.5Link to C50F4.6Link to C50F4.7RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to T23D8.5Link to K06C4.2Link to K06C4.10Link to F54E12.3Link to F17E9.12Link to ZK131.8Link to ZK131.4Link to F45F2.3Link to ZK131.1Link to F22B3.1Link to F55G1.11Link to F07B7.9Link to B0035.9Link to T10C6.14Link to C50F4.6Link to C50F4.5geneMap Link to C50F4.13.2Link to C50F4.13.3Link to C50F4.13.1Link to C50F4.5RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to T23D8.5Link to K06C4.2Link to K06C4.10Link to F54E12.3Link to F17E9.12Link to ZK131.8Link to ZK131.4Link to F45F2.3Link to ZK131.1Link to F22B3.1Link to F55G1.11Link to F07B7.9Link to B0035.9Link to T10C6.14geneMap
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RNAi Experiment: Simmer:C50F4.5 Ace View of Simmer:C50F4.5
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  C50F4.5 (his-41)
Description of "C50F4.5"  his-41 encodes an H2B histone.
KOG Annotation  Histone H2B
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (V:9547921..9548789)
Transcript overlap: 470 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 407
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "C50F4.5" Links  Wormbase NCBI
Gene Inhibited  C50F4.13 (his-35)
Description of "C50F4.13"  his-35 encodes an H2A histone.
KOG Annotation  Histone 2A
What's a KOG?
Evidence for Inhibition 
ePCR Transcript overlap: 5 nt Explain types of evidence for RNAi inhibition
External "C50F4.13" Links  Wormbase NCBI
Simmer:C50F4.5 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance 50 - 80 %
Larval  Lva
Adult  Unc
Simmer:C50F4.5 Experiment Details Ace View
Laboratory  NL
RNAi Reagent & Type  sjj_C50F4.5 (PCR_reagent)
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Date  2003-10-01
Gene Plot of C50F4.13 Browse using GBrowse
Gene Graph
Gene Plot of C50F4.5 Browse using GBrowse
Gene Graph