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RNAi Experiment: Simmer:C50F4.7:Screen Ace View of Simmer:C50F4.7:Screen
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  C50F4.7 (his-37)
Description of "C50F4.7"  his-37 encodes an H4 histone.
Evidence for Inhibition 
ePCR Status: Unique_ePCR (V:9549545..9550260)
Transcript overlap: 448 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 385
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.812
Wormbase (BLAST) RNAi primary
External "C50F4.7" Links  Wormbase NCBI
Gene Inhibited  C50F4.14
Description of "C50F4.14"  The C50F4.14 gene encodes a putative GDP-fucose transporter orthologous to the human GDP-FUCOSE TRANSPORTER 1 gene (LAD II; OMIM:605881), which when mutated leads to congenital disorder of glycosylation, type IIc.
KOG Annotation  GDP-fucose transporter
What's a KOG?
Evidence for Inhibition 
ePCR Transcript overlap: 45 nt Explain types of evidence for RNAi inhibition
External "C50F4.14" Links  Wormbase NCBI
Gene Inhibited  F17E9.12 (his-31)
Description of "F17E9.12"  his-31 encodes an H4 histone; his-31 is contained within the histone gene cluster HIS5.
Evidence for Inhibition 
Sliding Window Raw score: 89
Relative score: 0.231 (Best raw score= for Gene )
Specificity index: 0.188
Wormbase (BLAST) RNAi secondary
External "F17E9.12" Links  Wormbase NCBI
Simmer:C50F4.7:Screen Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance 20 - 40 %
Larval  Gro
Lvl
Adult  Unc
Simmer:C50F4.7:Screen Experiment Details Ace View
Laboratory  NL
RNAi Reagent & Type  sjj_C50F4.7 (PCR_reagent)
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Date  2003-10-01
Gene Plot of C50F4.14 Browse using GBrowse
Gene Graph
Gene Plot of C50F4.7 Browse using GBrowse
Gene Graph
Gene Plot of F17E9.12 Browse using GBrowse
Gene Graph