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RNAi Experiment: Simmer:C52E4.4 Ace View of Simmer:C52E4.4
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  C52E4.4 (rpt-1)
Description of "C52E4.4"  rpt-1 encodes a predicted ATPase subunit of the 19S regulatory complex of the proteasome that affects fertility and embryonic viability.
KOG Annotation  26S proteasome regulatory complex, ATPase RPT1
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (V:11983416..11984585)
Transcript overlap: 910 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 847
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "C52E4.4" Links  Wormbase NCBI
Simmer:C52E4.4 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance 100 %
Simmer:C52E4.4 Experiment Details Ace View
Laboratory  NL
RNAi Reagent & Type  sjj_C52E4.4 (PCR_reagent)
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Date  2003-10-01
Gene Plot of C52E4.4 Browse using GBrowse
Gene Graph