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RNAi Experiment: Simmer:C54G4.8:Screen_A Ace View of Simmer:C54G4.8:Screen_A
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  C54G4.8 (cyc-1)
Description of "C54G4.8"  cyc-1 encodes a component of complex III ( cytochrome c reductase) required for normal ATP production; reduction of ATP production by cyc-1(RNAi) decreases growth rate and body size, slows behavior, and increases lifespan; cyc-1 encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial
KOG Annotation  Cytochrome c1
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (I:8023293..8024410)
Transcript overlap: 824 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 698
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "C54G4.8" Links  Wormbase NCBI
Simmer:C54G4.8:Screen_A Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance 90 %
Larval  Lva
Simmer:C54G4.8:Screen_A Experiment Details Ace View
Laboratory  NL
RNAi Reagent & Type  sjj_C54G4.8 (PCR_reagent)
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Date  2003-10-01
Gene Plot of C54G4.8 Browse using GBrowse
Gene Graph