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RNAi Experiment: Simmer:F11A10.2 Ace View of Simmer:F11A10.2
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F11A10.7
Description of "F11A10.7"  Associated GO Term : nucleotide binding
KOG Annotation  RRM domain
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (IV:12085112..12086227)
Transcript overlap: 835 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 814
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.841
Wormbase (BLAST) RNAi primary
External "F11A10.7" Links  Wormbase NCBI
Gene Inhibited  F11A10.2
Description of "F11A10.2"  Associated GO Term : nucleic acid binding
KOG Annotation  Splicing factor 3a, subunit 2
What's a KOG?
Evidence for Inhibition 
ePCR Status: Bottom50_percentile_ePCR (IV:12085112..12086227)
Transcript overlap: 175 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 154
Relative score: 0.189 (Best raw score= for Gene )
Specificity index: 0.159
Wormbase (BLAST) RNAi primary
External "F11A10.2" Links  Wormbase NCBI
Simmer:F11A10.2 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance 90 %
Simmer:F11A10.2 Experiment Details Ace View
Laboratory  NL
RNAi Reagent & Type  sjj_F11A10.2 (PCR_reagent)
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Date  2003-10-01
Gene Plot of F11A10.7 Browse using GBrowse
Gene Graph
Gene Plot of F11A10.2 Browse using GBrowse
Gene Graph