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RNAi Experiment: Simmer:F11E6.5 Ace View of Simmer:F11E6.5
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F11E6.5 (elo-2)
Description of "F11E6.5"  The elo-2 gene encodes a palmitic acid elongase, homologous to polyunsaturated fatty acid (PUFA) elongases such as ELO-1, that is required for normally rapid growth, normally large body size, fertility, and for the quantitative regulation of the ultradian defecation rhythm; the joint action of ELO-2 with ELO-1 is strongly required for 20-carbon PUFA production and for general viability; elo-2 is most strongly expressed in intestinal cells, as well as other tissues such as the ventral nerve cord, pharyngeal muscles, uterus, and tail.
KOG Annotation  Long chain fatty acid elongase
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (IV:17466273..17467373)
Transcript overlap: 781 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 676
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "F11E6.5" Links  Wormbase NCBI
Simmer:F11E6.5 Phenotypes Help with Phenotypes
Larval  Gro
Simmer:F11E6.5 Experiment Details Ace View
Laboratory  NL
RNAi Reagent & Type  sjj_F11E6.5 (PCR_reagent)
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Date  2003-10-01
Gene Plot of F11E6.5 Browse using GBrowse
Gene Graph