Link to F16B4.6Link to F16B4.5bRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to F16B4.6Link to F16B4.5bLink to F16B4.5aRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to Y56A3A.17bLink to Y56A3A.17aLink to Y56A3A.18.2Link to Y56A3A.18.1RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap
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RNAi Experiment: Simmer:F16B4.6 Ace View of Simmer:F16B4.6
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F16B4.6
Description of "F16B4.6"  This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial.
KOG Annotation  Acyl carrier protein/NADH-ubiquinone oxidoreductase, NDUFAB1/SDAP subunit
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (V:1587104..1589161)
Transcript overlap: 672 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 588
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.89
Wormbase (BLAST) RNAi primary
External "F16B4.6" Links  Wormbase NCBI
Gene Inhibited  F16B4.5
Evidence for Inhibition 
ePCR Transcript overlap: 6 nt Explain types of evidence for RNAi inhibition
External "F16B4.5" Links  Wormbase NCBI
Gene Inhibited  Y56A3A.18
Description of "Y56A3A.18"  Associated GO Term : nucleic acid binding
KOG Annotation  U1-like Zn-finger-containing protein, probabl erole in RNA processing/splicing
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 73
Relative score: 0.124 (Best raw score= for Gene )
Specificity index: 0.11
Wormbase (BLAST) RNAi secondary
External "Y56A3A.18" Links  Wormbase NCBI
Simmer:F16B4.6 Phenotypes Help with Phenotypes
Larval  Gro
Simmer:F16B4.6 Experiment Details Ace View
Laboratory  NL
RNAi Reagent & Type  sjj_F16B4.6 (PCR_reagent)
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Date  2003-10-01
Gene Plot of F16B4.5 Browse using GBrowse
Gene Graph
Gene Plot of Y56A3A.18 Browse using GBrowse
Gene Graph
Gene Plot of F16B4.6 Browse using GBrowse
Gene Graph