Link to F18A1.3bLink to F18A1.3dLink to F18A1.3a.2Link to F18A1.3a.1Link to F18A1.3cLink to F18A1.2.2Link to F18A1.2.1Link to F18A1.2.3RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to F18A1.3a.1Link to F18A1.3a.2Link to F18A1.3bLink to F18A1.2.2Link to F18A1.2.1Link to F18A1.2.3Link to F18A1.3dgeneMap Link to F18A1.4bLink to F18A1.4aLink to F18A1.3bLink to F18A1.3dLink to F18A1.3a.2Link to F18A1.3a.1Link to F18A1.3cLink to F18A1.2.2Link to F18A1.2.1Link to F18A1.2.3RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to F18A1.3a.1Link to F18A1.3a.2Link to F18A1.3bLink to F18A1.2.2Link to F18A1.2.1Link to F18A1.2.3geneMap
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RNAi Experiment: Simmer:F18A1.2 Ace View of Simmer:F18A1.2
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F18A1.2 (lin-26)
Description of "F18A1.2"  lin-26 encodes a putative C2H2 zinc finger-containing protein required for proper differentiation of ectodermal and mesodermal epithelial cells; LIN-26 is expressed in many different cell types including the rectal rep cells, the somatic gonad, glial cells, and hypodermal cells; ectopic LIN-26 expression during embryogenesis induces epithelial-like cell fates suggesting that LIN-26 is sufficient for epithelial differentiation.
Evidence for Inhibition 
ePCR Status: Best_ePCR (II:7682506..7683581)
Transcript overlap: 939 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 918
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.777
Wormbase (BLAST) RNAi primary
External "F18A1.2" Links  Wormbase NCBI
Gene Inhibited  F18A1.3 (lir-1)
Description of "F18A1.3"  LIR-1 has no obvious effect on development when ectopically expressed in embryos, despite having a primary sequence closely similar to that of LIN-26.
Evidence for Inhibition 
ePCR Status: Bottom50_percentile_ePCR (II:7682506..7683581)
Transcript overlap: 326 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 263
Relative score: 0.286 (Best raw score= for Gene )
Specificity index: 0.223
External "F18A1.3" Links  Wormbase NCBI
Simmer:F18A1.2 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance 100 %
Simmer:F18A1.2 Experiment Details Ace View
Laboratory  NL
RNAi Reagent & Type  sjj_F18A1.2 (PCR_reagent)
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Date  2003-10-01
Gene Plot of F18A1.2 Browse using GBrowse
Gene Graph
Gene Plot of F18A1.3 Browse using GBrowse
Gene Graph