Link to F22B5.2Link to F22B5.1Link to F22B5.3RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to F22B5.2Link to F22B5.1RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap
Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 
RNAi Experiment: Simmer:F22B5.1 Ace View of Simmer:F22B5.1
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F22B5.1 (evl-20)
Description of "F22B5.1"  evl-20 encodes a functional ortholog of human ADP-ribosylation factor-like protein 2 (ARL2; OMIM:601175), with evl-20(ar103) mutants being rescued by transgenic human ARL2 but not ARL1 or ARL3-7; EVL-20 is required for cortical microtubule formation during cytokinesis and morphogenesis; EVL-20 is required for vulval, gonadal, and male tail development, as well as for embryonic mitosis, hypodermal enclosure, and elongation; EVL-20 is expressed in migrating hypodermal embryonic cells, larval vulval and somatic gonad cells, larval and adult neurons, and adult male proctodeal cells, being subcellularly associated with both the cell cortex and astral microtubules.
KOG Annotation  GTP-binding ADP-ribosylation factor-like protein ARL2
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (II:8444130..8445070)
Transcript overlap: 555 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 513
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "F22B5.1" Links  Wormbase NCBI
Gene Inhibited  F22B5.2 (eif-3.G)
Description of "F22B5.2"  eif-3.
KOG Annotation  Translation initiation factor 3, subunit g (eIF-3g)
What's a KOG?
Evidence for Inhibition 
ePCR Transcript overlap: 34 nt Explain types of evidence for RNAi inhibition
External "F22B5.2" Links  Wormbase NCBI
Simmer:F22B5.1 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance 20 - 40 %
Larval  Gro
Adult  Pvl
Rup
Stp
Simmer:F22B5.1 Experiment Details Ace View
Laboratory  NL
RNAi Reagent & Type  sjj_F22B5.1 (PCR_reagent)
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Date  2003-10-01
Gene Plot of F22B5.1 Browse using GBrowse
Gene Graph
Gene Plot of F22B5.2 Browse using GBrowse
Gene Graph