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RNAi Experiment: Simmer:F23F1.8 Ace View of Simmer:F23F1.8
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F23F1.8 (rpt-4)
Description of "F23F1.8"  rpt-4 encodes a predicted ATPase subunit of the 19S regulatory complex of the proteasome that affects body morphology, embryonic viability, growth, movement, and fertility; interacts with itself in yeast two-hybrid assays.
KOG Annotation  26S proteasome regulatory complex, ATPase RPT4
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (II:42393..43430)
Transcript overlap: 938 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 875
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "F23F1.8" Links  Wormbase NCBI
Simmer:F23F1.8 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance 100 %
Adult  Ste brood size (1 out of 5)
Simmer:F23F1.8 Experiment Details Ace View
Laboratory  NL
RNAi Reagent & Type  sjj_F23F1.8 (PCR_reagent)
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Date  2003-10-01
Gene Plot of F23F1.8 Browse using GBrowse
Gene Graph