Link to F25H2.9RNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentgeneMap
Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
RNAi Experiment: Simmer:F25H2.9:Screen_A Ace View of Simmer:F25H2.9:Screen_A
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F25H2.9 (pas-5)
Description of "F25H2.9"  Associated GO Term : threonine endopeptidase activity
KOG Annotation  20S proteasome, regulatory subunit alpha type PSMA5/PUP2
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (I:10566259..10567327)
Transcript overlap: 852 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 789
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "F25H2.9" Links  Wormbase NCBI
Simmer:F25H2.9:Screen_A Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance 90 %
Larval  Lva
Adult  Ste brood size (1 out of 5)
Simmer:F25H2.9:Screen_A Experiment Details Ace View
Laboratory  NL
RNAi Reagent & Type  sjj_F25H2.9 (PCR_reagent)
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Date  2003-10-01
Gene Plot of F25H2.9 Browse using GBrowse
Gene Graph