Link to F25H9.5Link to F25H9.6Link to F25H9.7RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to F25H9.5RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap
Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 
RNAi Experiment: Simmer:F25H9.6:Repeat_a Ace View of Simmer:F25H9.6:Repeat_a
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F25H9.6
KOG Annotation  Halotolerance protein HAL3 (contains flavoprotein domain)
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (V:13469619..13470809)
Transcript overlap: 817 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 714
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.902
Wormbase (BLAST) RNAi primary
External "F25H9.6" Links  Wormbase NCBI
Gene Inhibited  F25H9.5 (frm-10)
Description of "F25H9.5"  frm-10 encodes a protein that contains an N-terminal FERM (Band 4.1-ezrin-radixin-moesin) domain; by homology, FRM-10 is predicted to function as a membrane-cytoskeleton linker protein that plays a role in cell adhesion, migration, or organization of cell surface structures; however, as loss of frm-10 activity via large-scale RNAi screens does not result in any obvious abnormalities, the precise role of FRM-10 in C. elegans development and/or behavior is not yet known.
KOG Annotation  FERM domain-containing protein KRIT1
What's a KOG?
Evidence for Inhibition 
ePCR Status: Bottom50_percentile_ePCR (V:13469619..13470809)
Transcript overlap: 99 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 78
Relative score: 0.109 (Best raw score= for Gene )
Specificity index: 0.098
External "F25H9.5" Links  Wormbase NCBI
Simmer:F25H9.6:Repeat_a Phenotypes Help with Phenotypes
Larval  Gro
Adult  Stp
Simmer:F25H9.6:Repeat_a Experiment Details Ace View
Laboratory  NL
RNAi Reagent & Type  sjj_F25H9.6 (PCR_reagent)
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Date  2003-10-01
Gene Plot of F25H9.5 Browse using GBrowse
Gene Graph
Gene Plot of F25H9.6 Browse using GBrowse
Gene Graph